BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6102

Title: Solution structure of conserved protein YbeD from E. coli

Deposition date: 2004-02-19 Original release date: 2005-01-20

Authors: Kozlov, G.; Gehring, K.

Citation: Kozlov, G.; Elias, D.; Semesi, A.; Cygler, M.; Gehring, K.. "Structural similarity of Ybed protein from Escherichia coli to allosteric regulatory domains"  J. Bacteriol. 186, 8083-8088 (2004).

Assembly members:
YbeD, polymer, 109 residues, 12403 Da.

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
YbeD: MGTSHHHHHHSSGRENLYFQ GHMKTKLNELLEFPTPFTYK VMGQALPELVDQVVEVVQRH APGDYTPTVKPSSKGNYHSV SITINATHIEQVETLYEELG KIDIVRMVL

Data sets:
Data typeCount
1H chemical shifts434
13C chemical shifts157
15N chemical shifts78

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Related Database Links:

PDB 1RWU
DBJ BAA35274 BAB34092 BAG76222 BAI24034 BAI29501
EMBL CAD05113 CAP75130 CAQ31106 CAQ89971 CAQ97484
GB AAA66341 AAB40831 AAC73732 AAG54965 AAL19587
PIR AG0580
REF NP_286357 NP_308696 NP_415164 NP_455212 NP_459628
SP A1A8Q6 A7ZJ19 A7ZXQ8 A8AJH3 A9MKE1

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts