BMRB Entry 6137
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6137
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Title: NMR solution structure of proBnIb of 2S albumin stortage proton from Brassica napus PubMed: 15609998
Deposition date: 2004-03-08 Original release date: 2005-01-24
Authors: Pantoja, David; Bruix, M.; Rico, M.; Santoro, J.
Citation: Pantoja-Uceda, D.; Palomares, O.; Bruix, M.; Villalba, M.; Rodriguez, R.; Rico, M.; Santoro, J.. "Solution structure and stability against digestion of rproBnIb from rapeseed: relationship to its allergenic properties" Biochemistry 43, 16036-16045 (2004).
Assembly members:
Brassica napus, polymer, 109 residues, Formula weight is not available
Natural source: Common Name: Rape Taxonomy ID: 3708 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Brassica napus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Brassica napus: QPQKCQREFQQEQHLRACQQ
WIRQQLAGSPFSENQWGPQQ
GPSLREQCCNELYQEDQVCV
CPTLKQAAKSVRVQGQHGPF
QSTRIYQIAKNLPNVCNMKQ
IGTCPFIAI
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 674 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | rproBnIb monomer | 1 |
Entities:
Entity 1, rproBnIb monomer 109 residues - Formula weight is not available
| 1 | GLN | PRO | GLN | LYS | CYS | GLN | ARG | GLU | PHE | GLN | ||||
| 2 | GLN | GLU | GLN | HIS | LEU | ARG | ALA | CYS | GLN | GLN | ||||
| 3 | TRP | ILE | ARG | GLN | GLN | LEU | ALA | GLY | SER | PRO | ||||
| 4 | PHE | SER | GLU | ASN | GLN | TRP | GLY | PRO | GLN | GLN | ||||
| 5 | GLY | PRO | SER | LEU | ARG | GLU | GLN | CYS | CYS | ASN | ||||
| 6 | GLU | LEU | TYR | GLN | GLU | ASP | GLN | VAL | CYS | VAL | ||||
| 7 | CYS | PRO | THR | LEU | LYS | GLN | ALA | ALA | LYS | SER | ||||
| 8 | VAL | ARG | VAL | GLN | GLY | GLN | HIS | GLY | PRO | PHE | ||||
| 9 | GLN | SER | THR | ARG | ILE | TYR | GLN | ILE | ALA | LYS | ||||
| 10 | ASN | LEU | PRO | ASN | VAL | CYS | ASN | MET | LYS | GLN | ||||
| 11 | ILE | GLY | THR | CYS | PRO | PHE | ILE | ALA | ILE |
Samples:
sample_1: Brassica napus mM
Ex-cond_1: pH: 3.0; temperature: 308 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| COSY | sample_1 | not available | Ex-cond_1 |
| TOCSY | sample_1 | not available | Ex-cond_1 |
| NOESY | sample_1 | not available | Ex-cond_1 |
Software:
NMRView v5.0.4 - asignment
NMR spectrometers:
- BRUKER DMX 600 MHz