BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6509

Title: Solution Structure of the ScYLV P1-P2 Frameshifting Pseudoknot   PubMed: 16123125

Deposition date: 2005-02-17 Original release date: 2005-09-08

Authors: Cornish, P.; Hennig, M.; Giedroc, D.

Citation: Cornish, P.; Hennig, M.; Giedroc, D.. "A loop 2 cytidine-stem 1 minor groove interaction as a positive determinant for pseudoknot-stimulated -1 ribosomal frameshifting."  Proc. Natl. Acad. Sci. U. S. A. 102, 12694-12699 (2005).

Assembly members:
ScYLV RNA pseudoknot, polymer, 31 residues, Formula weight is not available

Natural source:   Common Name: Sugarcane Yellow Leaf Virus   Taxonomy ID: 94290   Superkingdom: Viruses   Kingdom: not available   Genus/species: Polerovirus Sugarcane yellow leaf virus

Experimental source:   Production method: enzymatic semi-synthesis

Entity Sequences (FASTA):
ScYLV RNA pseudoknot: AAAGUGGXGCCGACCACUUA AAAACACCGGA

Data sets:
Data typeCount
13C chemical shifts217
15N chemical shifts96
31P chemical shifts28

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all