BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 6923

Title: Backbone 1H, 13C, and 15N resonance assignments of the N-terminal domain of FKBP38 (FKBP38NTD)   PubMed: 24145868

Deposition date: 2005-12-12 Original release date: 2007-01-29

Authors: Kang, Cong Bao; Ye, Hong; Vivekanandan, Subramanian; Yoon, Ho Sup

Citation: Kang, Cong Bao; Ye, Hong; Chia, Joel; Choi, Bo-Hwa; Dhe-Paganon, Sirano; Simon, Bernd; Schutz, Ulrike; Sattler, Michael; Yoon, Ho Sup. "Functional role of the flexible N-terminal extension of FKBP38 in catalysis"  Sci. Rep. 3, .-. (2013).

Assembly members:
FKBP38, polymer, 157 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
FKBP38: MGQPPAEEAEQPGALAREFL AAMEPEPAPAPAPEEWLDIL GNGLLRKKTLVPGPPGSSRP VKGQVVTVHLQTSLENGTRV QEEPELVFTLGDCDVIQALD LSVPLMDVGETAMVTADSKY CYGPQGSRSPYIPPHAALCL EVTLKTAVDLEHHHHHH

Data sets:
Data typeCount
13C chemical shifts610
15N chemical shifts138
1H chemical shifts1009

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1FKBP381

Entities:

Entity 1, FKBP38 157 residues - Formula weight is not available

1   METGLYGLNPROPROALAGLUGLUALAGLU
2   GLNPROGLYALALEUALAARGGLUPHELEU
3   ALAALAMETGLUPROGLUPROALAPROALA
4   PROALAPROGLUGLUTRPLEUASPILELEU
5   GLYASNGLYLEULEUARGLYSLYSTHRLEU
6   VALPROGLYPROPROGLYSERSERARGPRO
7   VALLYSGLYGLNVALVALTHRVALHISLEU
8   GLNTHRSERLEUGLUASNGLYTHRARGVAL
9   GLNGLUGLUPROGLULEUVALPHETHRLEU
10   GLYASPCYSASPVALILEGLNALALEUASP
11   LEUSERVALPROLEUMETASPVALGLYGLU
12   THRALAMETVALTHRALAASPSERLYSTYR
13   CYSTYRGLYPROGLNGLYSERARGSERPRO
14   TYRILEPROPROHISALAALALEUCYSLEU
15   GLUVALTHRLEULYSTHRALAVALASPLEU
16   GLUHISHISHISHISHISHIS

Samples:

15N-FKBP38: FKBP38, [U-15N], 0.3 – 0.5 mM; Na-PO4 20 mM; NaCl 10 mM; DTT 1 mM; Na3N 1 mM; D2O 10%

15N_13C-FKBP38: FKBP38, [U-13C; U-15N], 0.3 – 0.5 mM; Na-PO4 20 mM; NaCl 10 mM; DTT 1 mM; Na3N 1 mM; D2O 10%

condition_15N13C-FKBP38: pH: 7; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
1H15N_HSQCnot availablenot availablecondition_15N13C-FKBP38
3D_HNCAnot availablenot availablecondition_15N13C-FKBP38
3D_HN(CO)CAnot availablenot availablecondition_15N13C-FKBP38
3D_HNCOnot availablenot availablecondition_15N13C-FKBP38
3D_HNCACBnot availablenot availablecondition_15N13C-FKBP38
3D_CBCA(CO)NHnot availablenot availablecondition_15N13C-FKBP38

Software:

No software information available

NMR spectrometers:

  • Bruker Avance 700 MHz

Related Database Links:

BMRB 6902
PDB
DBJ BAD96558 BAG36163 BAG72557 BAH13306
EMBL CAD98028 CAL37783
GB AAB00102 AAC28753 AAH09966 AAO39020 AAQ84561
REF NP_001247999 NP_036313 XP_002761955 XP_002828980 XP_002828981
SP Q14318

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts