BMRB Entry 6925

Name: Backbone and Beta 1H, 13C, and 15N Chemical Shift Assignments for the Bacterial Toxin Kid
Published: 2006-11-06

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PDB ID: 2c06
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6925
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Backbone and Beta 1H, 13C, and 15N Chemical Shift Assignments for the Bacterial Toxin Kid PubMed: 16413033

Deposition date: 2006-04-13 Original release date: 2006-11-06

Authors: Kamphuis, Monique; Boelens, Rolf

Citation: Kamphuis, Monique; Bonvin, A.; Monti, M.; Lemonnier, M.; Munoz-Gomez, A.; van den Heuvel, R.; Diaz-Orejas, R.; Boelens, Rolf. "Model for RNA binding and the catalytic site of the RNase Kid of the bacterial parD toxin-antitoxin system" J. Mol. Biol. 357, 115-126 (2006).

Assembly members:
Kid toxin, polymer, 110 residues, Formula weight is not available

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):
Kid toxin: MERGEIWLVSLDPTAGHEQQ GTRPVLIVTPAAFNRVTRLP VVVPVTSGGNFARTAGFAVS LDGVGIRTTGVVRCDQPRTI DMKARGGKRLERVPETIMNE VLGRLSTILT

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	308
15N chemical shifts	102
1H chemical shifts	384

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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1	MET	GLU	ARG	GLY	GLU	ILE	TRP	LEU	VAL	SER
2	LEU	ASP	PRO	THR	ALA	GLY	HIS	GLU	GLN	GLN
3	GLY	THR	ARG	PRO	VAL	LEU	ILE	VAL	THR	PRO
4	ALA	ALA	PHE	ASN	ARG	VAL	THR	ARG	LEU	PRO
5	VAL	VAL	VAL	PRO	VAL	THR	SER	GLY	GLY	ASN
6	PHE	ALA	ARG	THR	ALA	GLY	PHE	ALA	VAL	SER
7	LEU	ASP	GLY	VAL	GLY	ILE	ARG	THR	THR	GLY
8	VAL	VAL	ARG	CYS	ASP	GLN	PRO	ARG	THR	ILE
9	ASP	MET	LYS	ALA	ARG	GLY	GLY	LYS	ARG	LEU
10	GLU	ARG	VAL	PRO	GLU	THR	ILE	MET	ASN	GLU
11	VAL	LEU	GLY	ARG	LEU	SER	THR	ILE	LEU	THR

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	not available	conditions_1
2D 1H-13C HSQC	sample_1	not available	conditions_1
3D HNCA	sample_1	not available	conditions_1
3D HN(CO)CA	sample_1	not available	conditions_1
3D HNCACB	sample_1	not available	conditions_1
3D CBA(CO)NH	sample_1	not available	conditions_1
3D HNCO	sample_1	not available	conditions_1
3D HA(CA)NH	sample_1	not available	conditions_1
3D HBA(CO)NH	sample_1	not available	conditions_1

PDB	1M1F 2C06
DBJ	BAA78898 BAL45864 BAL48674 BAN28644 BAP10671
EMBL	CAA29585 CAB90820 CAB90822 CAD27776 CAH64731
GB	AAA26070 AAO49558 AAR05736 AAR25128 AAZ03778
REF	NP_052994 NP_862963 NP_957647 WP_000439432 WP_000439433
SP	P13976

Biological Magnetic Resonance Data Bank

BMRB Entry 6925

Title: Backbone and Beta 1H, 13C, and 15N Chemical Shift Assignments for the Bacterial Toxin Kid PubMed: 16413033

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	GLU	ARG	GLY	GLU	ILE	TRP	LEU	VAL	SER
2	LEU	ASP	PRO	THR	ALA	GLY	HIS	GLU	GLN	GLN
3	GLY	THR	ARG	PRO	VAL	LEU	ILE	VAL	THR	PRO
4	ALA	ALA	PHE	ASN	ARG	VAL	THR	ARG	LEU	PRO
5	VAL	VAL	VAL	PRO	VAL	THR	SER	GLY	GLY	ASN
6	PHE	ALA	ARG	THR	ALA	GLY	PHE	ALA	VAL	SER
7	LEU	ASP	GLY	VAL	GLY	ILE	ARG	THR	THR	GLY
8	VAL	VAL	ARG	CYS	ASP	GLN	PRO	ARG	THR	ILE
9	ASP	MET	LYS	ALA	ARG	GLY	GLY	LYS	ARG	LEU
10	GLU	ARG	VAL	PRO	GLU	THR	ILE	MET	ASN	GLU
11	VAL	LEU	GLY	ARG	LEU	SER	THR	ILE	LEU	THR

1	MET	GLU	ARG	GLY	GLU	ILE	TRP	LEU	VAL	SER
2	LEU	ASP	PRO	THR	ALA	GLY	HIS	GLU	GLN	GLN
3	GLY	THR	ARG	PRO	VAL	LEU	ILE	VAL	THR	PRO
4	ALA	ALA	PHE	ASN	ARG	VAL	THR	ARG	LEU	PRO
5	VAL	VAL	VAL	PRO	VAL	THR	SER	GLY	GLY	ASN
6	PHE	ALA	ARG	THR	ALA	GLY	PHE	ALA	VAL	SER
7	LEU	ASP	GLY	VAL	GLY	ILE	ARG	THR	THR	GLY
8	VAL	VAL	ARG	CYS	ASP	GLN	PRO	ARG	THR	ILE
9	ASP	MET	LYS	ALA	ARG	GLY	GLY	LYS	ARG	LEU
10	GLU	ARG	VAL	PRO	GLU	THR	ILE	MET	ASN	GLU
11	VAL	LEU	GLY	ARG	LEU	SER	THR	ILE	LEU	THR

1	MET	GLU	ARG	GLY	GLU	ILE	TRP	LEU	VAL	SER
2	LEU	ASP	PRO	THR	ALA	GLY	HIS	GLU	GLN	GLN
3	GLY	THR	ARG	PRO	VAL	LEU	ILE	VAL	THR	PRO
4	ALA	ALA	PHE	ASN	ARG	VAL	THR	ARG	LEU	PRO
5	VAL	VAL	VAL	PRO	VAL	THR	SER	GLY	GLY	ASN
6	PHE	ALA	ARG	THR	ALA	GLY	PHE	ALA	VAL	SER
7	LEU	ASP	GLY	VAL	GLY	ILE	ARG	THR	THR	GLY
8	VAL	VAL	ARG	CYS	ASP	GLN	PRO	ARG	THR	ILE
9	ASP	MET	LYS	ALA	ARG	GLY	GLY	LYS	ARG	LEU
10	GLU	ARG	VAL	PRO	GLU	THR	ILE	MET	ASN	GLU
11	VAL	LEU	GLY	ARG	LEU	SER	THR	ILE	LEU	THR