BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 7005

Title: The PP-fold Solution Structure of Human Polypeptide YY and Human Polypeptide YY 3-36 as Determined by NMR   PubMed: 16819834

Deposition date: 2006-02-28 Original release date: 2006-10-19

Authors: Nygaard, R.

Citation: Nygaard, R.; Nielbo, S.; Schwartz, T.; Poulsen, F.. "The PP-Fold Solution Structure of Human Polypeptide YY and Human PYY3-36 As Determined by NMR"  Biochemistry 45, 8350-8357 (2006).

Assembly members:
Peptide YY, polymer, 35 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
Peptide YY: IKPEAPGEDASPEELNRYYA SLRHYLNLVTRQRYX

Data sets:
Data typeCount
1H chemical shifts204

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Peptide YY1

Entities:

Entity 1, Peptide YY 35 residues - Formula weight is not available

1   ILELYSPROGLUALAPROGLYGLUASPALA
2   SERPROGLUGLULEUASNARGTYRTYRALA
3   SERLEUARGHISTYRLEUASNLEUVALTHR
4   ARGGLNARGTYRNH2

Samples:

sample_1: Peptide YY 1 mM; NaOH mM; HCl mM; D2O 10%; H2O 90%

sample_cond_1: pH: 4.6; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D DQF COSYsample_1not availablesample_cond_1
2D TOCSYsample_1not availablesample_cond_1
2D NOESYsample_1not availablesample_cond_1

Software:

NMRPipe - processing

Pronto3D - data analysis

CYANA v1.0 - structure solution

X-PLOR NIH v2.9 - structure solution

CNS v1.1 - refinement

NMR spectrometers:

  • Varian INOVA 750 MHz

Related Database Links:

BMRB 7006
PDB
DBJ BAA02997 BAA02998 BAA03000 BAA03002
EMBL CAG46926
GB AAA36433 AAB32641 AAB32642 AAH41057 AIC59196
REF NP_004151 XP_001113958 XP_002719223 XP_002748087 XP_003786336
SP P10082 Q9TR93