BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 7285

Title: 1H, 13C and 15N assignments for a double dockerin domain   PubMed: 17869267

Deposition date: 2006-09-01 Original release date: 2007-10-09

Authors: Tunnicliffe, Richard; Williamson, Mike; Higgins, Lee

Citation: Nagy, Tibor; Tunnicliffe, Richard; Higgins, Lee; Walters, Chris; Gilbert, Harry; Williamson, Mike. "Characterization of a double dockerin from the cellulosome of the anaerobic fungus Piromyces equi"  J. Mol. Biol. 373, 612-622 (2007).

Assembly members:
double dockerin, polymer, 96 residues, Formula weight is not available

Natural source:   Common Name: Piromyces equi   Taxonomy ID: 99929   Superkingdom: Eukaryota   Kingdom: Fungi   Genus/species: Piromyces equi

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
double dockerin: MACWAQSQGYNCCNNPSSTK VEYTDASGQWGVQNGQWCGI DYSYGQNQGNESCTGNGSYP CCNTCQATYTDGDGDWAFEN GNWCGIKNSCKQQPQN

Data sets:
Data typeCount
13C chemical shifts375
15N chemical shifts118
1H chemical shifts571

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1double dockerin1

Entities:

Entity 1, double dockerin 96 residues - Formula weight is not available

1   METALACYSTRPALAGLNSERGLNGLYTYR
2   ASNCYSCYSASNASNPROSERSERTHRLYS
3   VALGLUTYRTHRASPALASERGLYGLNTRP
4   GLYVALGLNASNGLYGLNTRPCYSGLYILE
5   ASPTYRSERTYRGLYGLNASNGLNGLYASN
6   GLUSERCYSTHRGLYASNGLYSERTYRPRO
7   CYSCYSASNTHRCYSGLNALATHRTYRTHR
8   ASPGLYASPGLYASPTRPALAPHEGLUASN
9   GLYASNTRPCYSGLYILELYSASNSERCYS
10   LYSGLNGLNPROGLNASN

Samples:

sample_1: double dockerin, [U-95% 13C; U-90% 15N], 0.8 mM; sodium phosphate 50 mM

conditions_1: pH: 6.5; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 15N-1Hsample_1not availableconditions_1
13C-1H HSQCsample_1not availableconditions_1
3D HNCOsample_1not availableconditions_1
HN(CA)COsample_1not availableconditions_1
CBCA(CO)NHsample_1not availableconditions_1
HNCACBsample_1not availableconditions_1
HNCAsample_1not availableconditions_1
HCCH-TOCSYmsample_1not availableconditions_1
CCH-TOCSYsample_1not availableconditions_1
13C/15N-edited NOESYsample_1not availableconditions_1

Software:

FELIX v2004, Accelrys Inc -

NMR spectrometers:

  • Bruker DRX 500 MHz
  • Bruker DRX 600 MHz
  • Bruker DRX 800 MHz

Related Database Links:

BMRB 3322
PDB

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