BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 7295

Title: 1H chemical shift assignments and 3JHNHa coupling constants for the synthetic analogue SCP of the bacillomycin Lc.   PubMed: 17129757

Deposition date: 2006-09-14 Original release date: 2006-10-20

Authors: Volpon, Laurent; Tsan, Pascale; Noguera-Mazon, Valerie; Besson, Francoise; Lancelin, Jean-Marc

Citation: Volpon, Laurent; Tsan, Pascale; Majer, Zsuzsa; Vass, Elemer; Hollosi, Miklos; Noguera, Valerie; Lancelin, Jean-Marc; Besson, Francoise. "NMR structure determination of a synthetic analogue of bacillomycin Lc reveals the strategic role of L-Asn1 in the natural iturinic antibiotics."  Spectrochemica Acta Part A 67, 1374-1381 (2006).

Assembly members:
Synthetic Cyclic Peptide (SCP), polymer, 8 residues, 866 Da.

Natural source:   Common Name: B. subtilis   Taxonomy ID: 1423   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Bacillus subtilis

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
Synthetic Cyclic Peptide (SCP): DXXSQXTX

Data sets:
Data typeCount
1H chemical shifts48
coupling constants8

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Synthetic Cyclo Peptide (SCP)1

Entities:

Entity 1, Synthetic Cyclo Peptide (SCP) 8 residues - 866 Da.

X = beta-Alanine

1   ASPDTYDSGSERGLNDSNTHRBAL

Samples:

sample_1: Synthetic Cyclic Peptide (SCP) 6 ± 0.2 mM; dmso-d6 100%

conditions_1: temperature: 292 K

Experiments:

NameSampleSample stateSample conditions
DQF-COSYsample_1not availableconditions_1
TOCSY (HOHAHA)sample_1not availableconditions_1
ROESYsample_1not availableconditions_1
NOESYsample_1not availableconditions_1

Software:

xwinnmr, Bruker -

GIFA v4.0, Marc-Andre Delsuc -

Molmol v2.4 -

NMR spectrometers:

  • Bruker Avance DRX 500 MHz