BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 34316

Title: Peptide-membrane interaction between targeting and lysis

Deposition date: 2018-09-14 Original release date: 2018-10-19

Authors: Schneider, G.; Blatter, M.

Citation: Blatter, M.; Schneider, G.. "Peptide-membrane interaction between targeting and lysis"  . ., .-..

Assembly members:
entity_1, polymer, 15 residues, 1481.974 Da.

Natural source:   Common Name: not available   Taxonomy ID: 32630   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
entity_1: KLLKLLKKVVGALGX

Data sets:
Data typeCount
13C chemical shifts56
1H chemical shifts124

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11

Entities:

Entity 1, entity_1 15 residues - 1481.974 Da.

1   LYSLEULEULYSLEULEULYSLYSVALVAL
2   GLYALALEUGLYNH2

Samples:

sample_1: peptide 10 mM

sample_conditions_1: ionic strength: 0 mM; pH: 5; pressure: 1 Pa; temperature: 291 K

Experiments:

NameSampleSample stateSample conditions
NOESYsample_1isotropicsample_conditions_1
2D 1H-13C HSQCsample_1isotropicsample_conditions_1
2D DQF-COSYsample_1isotropicsample_conditions_1

Software:

AMBER v3.97, Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman - refinement

CYANA, Guntert, Mumenthaler and Wuthrich - structure calculation

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

  • Bruker AvanceIII 500 MHz