BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 10249

Title: Solution structure of the C-terminal PH domain of human pleckstrin

Authors: Li, H.; Tomizawa, T.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.

Citation: Li, H.; Tomizawa, T.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.. "Solution structure of the C-terminal PH domain of human pleckstrin"  . ., .-..

Assembly members:
PH domain, polymer, 129 residues, Formula weight is not available

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: Cell free synthesis

Entity Sequences (FASTA):
PH domain: GSSGSSGVILKEEFRGVIIK QGCLLKQGHRRKNWKVRKFI LREDPAYLHYYDPAGAEDPL GAIHLRGCVVTSVESNSNGR KSEEENLFEIITADEVHYFL QAATPKERTEWIKAIQMASR TGKSGPSSG

Data sets:
Data typeCount
13C chemical shifts556
15N chemical shifts124
1H chemical shifts870

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1PH domain1

Entities:

Entity 1, PH domain 129 residues - Formula weight is not available

1   GLYSERSERGLYSERSERGLYVALILELEU
2   LYSGLUGLUPHEARGGLYVALILEILELYS
3   GLNGLYCYSLEULEULYSGLNGLYHISARG
4   ARGLYSASNTRPLYSVALARGLYSPHEILE
5   LEUARGGLUASPPROALATYRLEUHISTYR
6   TYRASPPROALAGLYALAGLUASPPROLEU
7   GLYALAILEHISLEUARGGLYCYSVALVAL
8   THRSERVALGLUSERASNSERASNGLYARG
9   LYSSERGLUGLUGLUASNLEUPHEGLUILE
10   ILETHRALAASPGLUVALHISTYRPHELEU
11   GLNALAALATHRPROLYSGLUARGTHRGLU
12   TRPILELYSALAILEGLNMETALASERARG
13   THRGLYLYSSERGLYPROSERSERGLY

Samples:

sample_1: PH domain, [U-13C; U-15N], 1.13 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 296 K

Experiments:

NameSampleSample stateSample conditions
3D 13C-separated NOESYsample_1isotropiccondition_1
3D 15N-separated NOESYsample_1isotropiccondition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20031121, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B. A. - data analysis

Kujira v0.913, Kobayashi, N. - data analysis

CYANA v1.0.7, Guentert, P. - refinement, structure solution

NMR spectrometers:

  • Bruker AVANCE 800 MHz

Related Database Links:

PDB