BMRB Entry 26692
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR26692
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Title: Solid State NMR sequential assignment of Amyloid b(1-42) fibrils PubMed: 27165577
Deposition date: 2015-10-23 Original release date: 2016-05-24
Authors: Ravotti, Francesco; Waelti, Marielle; Guentert, Peter; Meier, Beat; Riek, Roland; Boeckmann, Anja
Citation: Ravotti, Francesco; Waelti, Marielle; Guentert, Peter; Meier, Beat; Riek, Roland; Boeckmann, Anja. "Solid-State NMR sequential assignment of Amyloid-b (1-42) fibrils" Biomol. NMR Assign. 10, 269-276 (2016).
Assembly members:
Amyloid_Beta, polymer, 42 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Amyloid_Beta: DAEFRHDSGYEVHHQKLVFF
AEDVGSNKGAIIGLMVGGVV
IA
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 169 |
15N chemical shifts | 44 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | Amyloid Beta fibril | 1 |
Entities:
Entity 1, Amyloid Beta fibril 42 residues - Formula weight is not available
1 | ASP | ALA | GLU | PHE | ARG | HIS | ASP | SER | GLY | TYR | ||||
2 | GLU | VAL | HIS | HIS | GLN | LYS | LEU | VAL | PHE | PHE | ||||
3 | ALA | GLU | ASP | VAL | GLY | SER | ASN | LYS | GLY | ALA | ||||
4 | ILE | ILE | GLY | LEU | MET | VAL | GLY | GLY | VAL | VAL | ||||
5 | ILE | ALA |
Samples:
sample_1: Amyloid Beta, [U-13C], 20 mg
sample_conditions_1: pH: 7.4; pressure: 1 atm; temperature: 273 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
NCACX | sample_1 | isotropic | sample_conditions_1 |
NCOCX | sample_1 | isotropic | sample_conditions_1 |
CANCO | sample_1 | isotropic | sample_conditions_1 |
NCACB | sample_1 | isotropic | sample_conditions_1 |
CCC | sample_1 | isotropic | sample_conditions_1 |
NCA | sample_1 | isotropic | sample_conditions_1 |
NCO | sample_1 | isotropic | sample_conditions_1 |
DARR | sample_1 | isotropic | sample_conditions_1 |
Software:
TOPSPIN, Bruker Biospin, CCPN - chemical shift assignment, data analysis, processing
NMR spectrometers:
- Bruker Avance 850 MHz