BMRB Entry 27099
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR27099
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Title: Chemical shift assignment of gp17.1 by proton-detected solid-state NMR PubMed: 28644511
Deposition date: 2017-05-08 Original release date: 2017-06-29
Authors: Zinke, Maximilian; Fricke, Pascal; Lange, Sascha; Lange, Adam
Citation: Zinke, Maximilian; Fricke, Pascal; Samson, Camille; Hwang, Songhwan; Wall, Joseph; Lange, Sascha; Zinn-Justin, Sophie; Lange, Adam. "Bacteriophage Tail Tube Assembly Studied by Proton-Detected 4D Solid-State NMR" Angew. Chem. Int. Ed. Engl. 56, 9497-9501 (2017).
Assembly members:
gp17-1, polymer, 185 residues, Formula weight is not available
Natural source: Common Name: Bacillus phage SPP1 Taxonomy ID: 10724 Superkingdom: Viruses Kingdom: not available Genus/species: Lambdavirus SPP1
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
gp17-1: MGMPETPIMGQDVKYLFQSI
DAATGSAPLFPAYQTDGSVS
GERELFDEQTKNGRILGPGS
VADSGEVTYYGKRGDAGQKA
IEDAYQNGKQIKFWRVDTVK
NENDKYDAQFGFAYIESREY
SDGVEGAVEISISLQVIGEL
KNGEIDTLPEEIVNVSKGGY
DFQQPGQTTGEAPGTVPAPH
HHHHH
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 460 |
| 15N chemical shifts | 151 |
| 1H chemical shifts | 151 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | gp17.1 | 1 |
Entities:
Entity 1, gp17.1 185 residues - Formula weight is not available
| 1 | MET | GLY | MET | PRO | GLU | THR | PRO | ILE | MET | GLY | ||||
| 2 | GLN | ASP | VAL | LYS | TYR | LEU | PHE | GLN | SER | ILE | ||||
| 3 | ASP | ALA | ALA | THR | GLY | SER | ALA | PRO | LEU | PHE | ||||
| 4 | PRO | ALA | TYR | GLN | THR | ASP | GLY | SER | VAL | SER | ||||
| 5 | GLY | GLU | ARG | GLU | LEU | PHE | ASP | GLU | GLN | THR | ||||
| 6 | LYS | ASN | GLY | ARG | ILE | LEU | GLY | PRO | GLY | SER | ||||
| 7 | VAL | ALA | ASP | SER | GLY | GLU | VAL | THR | TYR | TYR | ||||
| 8 | GLY | LYS | ARG | GLY | ASP | ALA | GLY | GLN | LYS | ALA | ||||
| 9 | ILE | GLU | ASP | ALA | TYR | GLN | ASN | GLY | LYS | GLN | ||||
| 10 | ILE | LYS | PHE | TRP | ARG | VAL | ASP | THR | VAL | LYS | ||||
| 11 | ASN | GLU | ASN | ASP | LYS | TYR | ASP | ALA | GLN | PHE | ||||
| 12 | GLY | PHE | ALA | TYR | ILE | GLU | SER | ARG | GLU | TYR | ||||
| 13 | SER | ASP | GLY | VAL | GLU | GLY | ALA | VAL | GLU | ILE | ||||
| 14 | SER | ILE | SER | LEU | GLN | VAL | ILE | GLY | GLU | LEU | ||||
| 15 | LYS | ASN | GLY | GLU | ILE | ASP | THR | LEU | PRO | GLU | ||||
| 16 | GLU | ILE | VAL | ASN | VAL | SER | LYS | GLY | GLY | TYR | ||||
| 17 | ASP | PHE | GLN | GLN | PRO | GLY | GLN | THR | THR | GLY | ||||
| 18 | GLU | ALA | PRO | GLY | THR | VAL | PRO | ALA | PRO | HIS | ||||
| 19 | HIS | HIS | HIS | HIS | HIS |
Samples:
sample_1: gp17.1, [U-13C; U-15N; U-2H]; 100% back-exchange, 13 mg
sample_conditions_1: ionic strength: 0.5 M; pH: 7.4; pressure: 1 atm; temperature: 291 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D (H)NH | sample_1 | isotropic | sample_conditions_1 |
| 3D (H)CANH | sample_1 | isotropic | sample_conditions_1 |
| 3D (H)CNONH | sample_1 | isotropic | sample_conditions_1 |
| 3D (H)N(CACO)NH | sample_1 | isotropic | sample_conditions_1 |
| 4D (H)COCANH | sample_1 | isotropic | sample_conditions_1 |
| 4D (H)CBCANH | sample_1 | isotropic | sample_conditions_1 |
| 4D (H)CACONH | sample_1 | isotropic | sample_conditions_1 |
Software:
TOPSPIN, Bruker Biospin - collection, processing
Analysis, CCPN - chemical shift assignment
NMR spectrometers:
- Bruker Avance 900 MHz
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts