BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 6727

Title: 1H, 13C and 15N resonance assignments of telomeric repeat-binding domain of Arabidopsis thaliana   PubMed: 16337232

Authors: Cheng, Ying-Hsien; Sue, Shih-Che; Hsaio, Hsin-Hao; Huang, Tai-huang

Citation: Sue, Shih-Che; Hsaio, Hsin-Hao; Chung, Chih-Pin; Cheng, Ying-Hsien; Hsueh, Kuang-Lung; Chen, Chung Mong; Ho, Chia Hsing; Huang, Tai-huang. "Solution Structure of the Arabidopsis thaliana Telomeric Repeat-binding Protein DNA Binding Domain: A New Fold with an Additional C-terminal Helix."  J. Mol. Biol. 356, 72-85 (2005).

Assembly members:
telomeric repeat-binding domain of Arabidopsis thaliana, polymer, 105 residues, Formula weight is not available

Natural source:   Common Name: Arabidopsis thaliana   Taxonomy ID: 3702   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Arabidopsis thaliana

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
telomeric repeat-binding domain of Arabidopsis thaliana: GSHMLEDPQRRIRRPFSVAE VEALVQAVEKLGTGRWRDVK LCAFEDADHRTYVDLKDKWK TLVHTAKISPQQRRGEPVPQ ELLNRVLNAHGYWTQQQMQQ LQQNV

Data sets:
Data typeCount
13C chemical shifts399
15N chemical shifts96
1H chemical shifts619

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1telomeric repeat-binding domain of Arabidopsis thaliana1

Entities:

Entity 1, telomeric repeat-binding domain of Arabidopsis thaliana 105 residues - Formula weight is not available

1   GLYSERHISMETLEUGLUASPPROGLNARG
2   ARGILEARGARGPROPHESERVALALAGLU
3   VALGLUALALEUVALGLNALAVALGLULYS
4   LEUGLYTHRGLYARGTRPARGASPVALLYS
5   LEUCYSALAPHEGLUASPALAASPHISARG
6   THRTYRVALASPLEULYSASPLYSTRPLYS
7   THRLEUVALHISTHRALALYSILESERPRO
8   GLNGLNARGARGGLYGLUPROVALPROGLN
9   GLULEULEUASNARGVALLEUASNALAHIS
10   GLYTYRTRPTHRGLNGLNGLNMETGLNGLN
11   LEUGLNGLNASNVAL

Samples:

sample_1: AtTRP1d, [U-13C; U-15N], 1 mM

conditions_1: pH*: 7.4; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H-15N HSQCnot availablenot availablenot available
HNCAnot availablenot availablenot available
HN(CO)CAnot availablenot availablenot available
HNCOnot availablenot availablenot available
CBCANHnot availablenot availablenot available
CBCA(CO)NHnot availablenot availablenot available
HCCH-TOSCYnot availablenot availablenot available
HCCH-COSYnot availablenot availablenot available
HBHA(CO)NHnot availablenot availablenot available
15N NOESY-HSQCnot availablenot availablenot available
13C NOESY-HSQCnot availablenot availablenot available

Software:

xwinnmr v3.5 -

NMR spectrometers:

  • Bruker AVANCE 600 MHz

Related Database Links:

PDB
DBJ BAA97479 BAH19498 BAH56945
EMBL CAB50690
GB AAM91585 AAN15436 AAS10014 AED97184 AED97185
REF NP_001078770 NP_001078771 NP_200751 NP_851221 XP_002864634
SP Q8L7L8